Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TcraP01849 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TcraP01849 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
TcraP01849 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TcraP01849 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TcraP01849 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TcraP01849 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TcraP01849 Gm45768-201ENSMUST00000206763 3202 ntBASIC7.73□□□□□ -1.17
TcraP01849 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC7.72□□□□□ -1.17
TcraP01849 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
TcraP01849 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC7.72□□□□□ -1.17
TcraP01849 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Txk-206ENSMUST00000198464 2271 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC7.72□□□□□ -1.17
TcraP01849 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Gm38199-201ENSMUST00000192013 3277 ntBASIC7.72□□□□□ -1.17
TcraP01849 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Gm23949-201ENSMUST00000104027 127 ntBASIC7.72□□□□□ -1.17
TcraP01849 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC7.72□□□□□ -1.17
TcraP01849 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Gm12857-201ENSMUST00000117678 592 ntBASIC7.72□□□□□ -1.17
TcraP01849 Gm12501-201ENSMUST00000119163 529 ntBASIC7.72□□□□□ -1.17
TcraP01849 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Gm12196-201ENSMUST00000120954 262 ntBASIC7.72□□□□□ -1.17
TcraP01849 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC7.72□□□□□ -1.17
TcraP01849 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC7.72□□□□□ -1.17
TcraP01849 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC7.72□□□□□ -1.17
TcraP01849 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
TcraP01849 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Mrip-ps-201ENSMUST00000184613 940 ntBASIC7.72□□□□□ -1.17
TcraP01849 Gm5852-201ENSMUST00000194119 1021 ntBASIC7.72□□□□□ -1.17
TcraP01849 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC7.72□□□□□ -1.17
TcraP01849 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC7.72□□□□□ -1.17
TcraP01849 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC7.72□□□□□ -1.17
TcraP01849 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC7.72□□□□□ -1.17
TcraP01849 AC133602.1-201ENSMUST00000227510 509 ntBASIC7.72□□□□□ -1.17
TcraP01849 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Gm21759-201ENSMUST00000178345 1828 ntBASIC7.72□□□□□ -1.17
TcraP01849 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
TcraP01849 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Tbc1d14-203ENSMUST00000126077 4085 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
TcraP01849 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TcraP01849 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
TcraP01849 Gm7993-201ENSMUST00000200970 1384 ntBASIC7.71□□□□□ -1.17
TcraP01849 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.17
TcraP01849 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
TcraP01849 Galnt1-201ENSMUST00000000430 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Grik1-211ENSMUST00000228188 3221 ntBASIC7.71□□□□□ -1.17
TcraP01849 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 AU040320-203ENSMUST00000102608 4073 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Rsrc1-201ENSMUST00000046542 3062 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC7.71□□□□□ -1.17
TcraP01849 Fbxw11-202ENSMUST00000093205 3938 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TcraP01849 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms