Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Upk3aQ9JKX8 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm11619-201ENSMUST00000117474 237 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm11475-201ENSMUST00000118482 476 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm15285-201ENSMUST00000119271 473 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm13857-201ENSMUST00000139645 173 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm26943-201ENSMUST00000182295 957 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Mir6958-201ENSMUST00000184207 73 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm5700-201ENSMUST00000191483 989 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm19166-201ENSMUST00000196041 1063 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Upk3aQ9JKX8 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Gm24791-201ENSMUST00000104284 131 ntBASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Gm35713-201ENSMUST00000210516 199 ntBASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Upk3aQ9JKX8 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Gm12716-201ENSMUST00000120606 1354 ntBASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Gm6783-201ENSMUST00000120916 1437 ntBASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Gm5472-201ENSMUST00000178604 1678 ntBASIC10.21□□□□□ -0.78
Upk3aQ9JKX8 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms