Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC9.41□□□□□ -0.9
Scrt1Q99M85 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm6291-201ENSMUST00000179994 309 ntBASIC9.41□□□□□ -0.9
Scrt1Q99M85 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm38233-201ENSMUST00000194259 807 ntBASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm45258-201ENSMUST00000210042 853 ntBASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.41□□□□□ -0.9
Scrt1Q99M85 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC9.4□□□□□ -0.9
Scrt1Q99M85 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.4□□□□□ -0.9
Scrt1Q99M85 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm24933-201ENSMUST00000103762 110 ntBASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm23252-201ENSMUST00000103776 110 ntBASIC9.4□□□□□ -0.9
Scrt1Q99M85 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC9.4□□□□□ -0.9
Scrt1Q99M85 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Mir1941-201ENSMUST00000157834 83 ntBASIC9.4□□□□□ -0.9
Scrt1Q99M85 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm26443-201ENSMUST00000179610 110 ntBASIC9.4□□□□□ -0.9
Scrt1Q99M85 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm44640-201ENSMUST00000206894 247 ntBASIC9.4□□□□□ -0.9
Scrt1Q99M85 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm45893-201ENSMUST00000211899 247 ntBASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.4□□□□□ -0.9
Scrt1Q99M85 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.4□□□□□ -0.9
Scrt1Q99M85 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Scrt1Q99M85 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Scrt1Q99M85 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Scrt1Q99M85 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms