Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Usp11Q99K46 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Usp11Q99K46 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Usp11Q99K46 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Usp11Q99K46 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm25063-201ENSMUST00000104666 94 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm12663-201ENSMUST00000118481 958 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm12791-201ENSMUST00000120788 655 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm3828-201ENSMUST00000121817 257 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm24074-201ENSMUST00000158178 260 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm3726-201ENSMUST00000203110 785 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm7600-201ENSMUST00000209657 785 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 Gm9139-201ENSMUST00000218817 700 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC11.21□□□□□ -0.62
Usp11Q99K46 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Usp11Q99K46 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Usp11Q99K46 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.21□□□□□ -0.62
Usp11Q99K46 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.21□□□□□ -0.62
Usp11Q99K46 Gm37806-201ENSMUST00000194524 6387 ntBASIC11.21□□□□□ -0.62
Usp11Q99K46 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Usp11Q99K46 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.2□□□□□ -0.62
Usp11Q99K46 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.2□□□□□ -0.62
Usp11Q99K46 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm9673-201ENSMUST00000119287 781 ntBASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm12030-201ENSMUST00000121917 223 ntBASIC11.2□□□□□ -0.62
Usp11Q99K46 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm16165-201ENSMUST00000160140 795 ntBASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.2□□□□□ -0.62
Usp11Q99K46 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Usp11Q99K46 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Mir7032-201ENSMUST00000185154 79 ntBASIC11.2□□□□□ -0.62
Usp11Q99K46 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm9102-201ENSMUST00000219250 465 ntBASIC11.2□□□□□ -0.62
Usp11Q99K46 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp11Q99K46 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Usp11Q99K46 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms