Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 AC126459.1-201ENSMUST00000214791 2123 ntBASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim9Q8C7M3 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Gm37567-201ENSMUST00000193241 2279 ntBASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Gm15285-201ENSMUST00000119271 473 ntBASIC11.7□□□□□ -0.54
Trim9Q8C7M3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Gm19566-201ENSMUST00000199576 610 ntBASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.7□□□□□ -0.54
Trim9Q8C7M3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim9Q8C7M3 Gm37909-201ENSMUST00000193157 2159 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm11919-201ENSMUST00000117609 721 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm8482-201ENSMUST00000117972 471 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm13841-201ENSMUST00000118829 483 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm11449-201ENSMUST00000119175 476 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm14006-201ENSMUST00000122132 981 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm25661-201ENSMUST00000157704 296 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm8210-201ENSMUST00000178557 483 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm15454-201ENSMUST00000179718 483 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm4903-201ENSMUST00000210462 405 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm6344-201ENSMUST00000075962 483 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Gm7052-201ENSMUST00000167568 1512 ntBASIC11.69□□□□□ -0.54
Trim9Q8C7M3 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms