Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm7627-201ENSMUST00000183205 999 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm44155-201ENSMUST00000203923 412 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm6518-201ENSMUST00000208450 342 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 CT030035.1-201ENSMUST00000223964 935 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 CT010505.2-201ENSMUST00000227918 998 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm5278-201ENSMUST00000055957 552 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm6564-201ENSMUST00000075377 619 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Mir291b-201ENSMUST00000104838 79 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm6238-201ENSMUST00000120999 465 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Mir1941-201ENSMUST00000157834 83 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm8643-201ENSMUST00000195228 625 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm43854-201ENSMUST00000200418 394 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm8796-201ENSMUST00000219122 936 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh3rf2Q8BZT2 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sh3rf2Q8BZT2 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms