Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm5910-201ENSMUST00000211819 1746 ntBASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm7061-201ENSMUST00000118127 1416 ntBASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm8806-201ENSMUST00000120076 1407 ntBASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm12221-201ENSMUST00000125096 1131 ntBASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm3752-202ENSMUST00000167833 450 ntTSL 5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm10128-201ENSMUST00000171360 615 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm2956-202ENSMUST00000178722 450 ntTSL 5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm26875-201ENSMUST00000181006 950 ntBASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Mir6396-201ENSMUST00000183603 111 ntBASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm10340-202ENSMUST00000188235 615 ntTSL 5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 AC102523.2-201ENSMUST00000227813 983 ntBASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm15599-201ENSMUST00000122283 1345 ntBASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Apex2-205ENSMUST00000112725 3613 ntTSL 5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 AC147366.2-201ENSMUST00000226859 2038 ntBASIC12.33□□□□□ -0.43
Nup98Q6PFD9 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Nup98Q6PFD9 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Gm15476-201ENSMUST00000118247 1191 ntBASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Gm13624-201ENSMUST00000120263 462 ntBASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Olfr1155-201ENSMUST00000099843 945 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Gm43362-201ENSMUST00000198192 2470 ntBASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup98Q6PFD9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gm42764-201ENSMUST00000197835 741 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 AC100406.1-201ENSMUST00000217305 480 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gm5951-201ENSMUST00000220283 504 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gm9260-201ENSMUST00000199781 1380 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gm42714-201ENSMUST00000202063 1364 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gm36948-201ENSMUST00000194708 3247 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms