Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Gm45170-201ENSMUST00000206746 1671 ntBASIC12.77□□□□□ -0.37
Vps54Q5SPW0 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm37516-201ENSMUST00000192593 1954 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Mir291b-201ENSMUST00000104838 79 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm37390-201ENSMUST00000192452 872 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm44304-201ENSMUST00000200509 145 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm18010-201ENSMUST00000203553 202 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm18001-201ENSMUST00000212023 688 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Prss23os-202ENSMUST00000179361 1362 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Spata33-207ENSMUST00000212760 4074 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm37242-201ENSMUST00000191873 2085 ntBASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps54Q5SPW0 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm12716-201ENSMUST00000120606 1354 ntBASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm14006-201ENSMUST00000122132 981 ntBASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm4812-201ENSMUST00000182847 993 ntBASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm37597-201ENSMUST00000191853 382 ntBASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm37141-201ENSMUST00000191938 422 ntBASIC12.75□□□□□ -0.37
Vps54Q5SPW0 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm42617-201ENSMUST00000197640 1229 ntBASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm31941-201ENSMUST00000209689 350 ntBASIC12.75□□□□□ -0.37
Vps54Q5SPW0 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm9791-201ENSMUST00000060997 447 ntBASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps54Q5SPW0 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 248.7 ms