Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Atcayos-201ENSMUST00000129834 1350 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim63Q38HM4 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim63Q38HM4 Ndrg1-201ENSMUST00000005256 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim63Q38HM4 Trim66-201ENSMUST00000033339 4354 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim63Q38HM4 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim63Q38HM4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trim63Q38HM4 Aqp8-202ENSMUST00000098056 1451 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim63Q38HM4 Adal-202ENSMUST00000066155 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim63Q38HM4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim63Q38HM4 Tomm40l-201ENSMUST00000005817 4712 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim63Q38HM4 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim63Q38HM4 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 4930526F13Rik-201ENSMUST00000144718 1721 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Cpm-201ENSMUST00000020399 5195 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Ctbp2-214ENSMUST00000169570 3604 ntTSL 5 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Cpa4-201ENSMUST00000049251 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Washc4-201ENSMUST00000038388 5858 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm46218-202ENSMUST00000215520 1956 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Cd101-201ENSMUST00000147399 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gnl3l-201ENSMUST00000026297 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Arap1-203ENSMUST00000098243 3693 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm22189-201ENSMUST00000103822 86 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm4984-201ENSMUST00000115987 360 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm12502-201ENSMUST00000120197 444 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm13570-201ENSMUST00000140763 309 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm6498-201ENSMUST00000181413 1006 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 Mir7684-201ENSMUST00000183858 60 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm37917-201ENSMUST00000194711 392 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm45195-201ENSMUST00000205597 1008 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm44503-201ENSMUST00000149692 4383 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Trpc7-201ENSMUST00000022023 3483 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Lsm6-203ENSMUST00000130325 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm37949-201ENSMUST00000192808 2091 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trim63Q38HM4 Gm43792-201ENSMUST00000202492 2210 ntBASIC8.68□□□□□ -1.02
Trim63Q38HM4 Hacl1-201ENSMUST00000022437 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Mc3r-201ENSMUST00000038532 2623 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 Lrp1b-207ENSMUST00000142688 2911 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Sidt2-202ENSMUST00000114573 4012 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Trim9-203ENSMUST00000167755 4559 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Nrxn3-203ENSMUST00000110133 2699 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm15519-201ENSMUST00000120088 1566 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Auts2-212ENSMUST00000178555 309 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm27953-201ENSMUST00000185171 143 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm28898-201ENSMUST00000189604 2167 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm18697-201ENSMUST00000191179 2126 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Sox2ot-210ENSMUST00000197697 2533 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms