Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.52□□□□□ -0.72
Pdx1P52946 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Pdx1P52946 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Pdx1P52946 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pdx1P52946 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Pdx1P52946 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pdx1P52946 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Pdx1P52946 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pdx1P52946 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pdx1P52946 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.52□□□□□ -0.73
Pdx1P52946 Gm12628-201ENSMUST00000122193 382 ntBASIC10.52□□□□□ -0.73
Pdx1P52946 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC10.52□□□□□ -0.73
Pdx1P52946 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Pdx1P52946 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC10.52□□□□□ -0.73
Pdx1P52946 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.52□□□□□ -0.73
Pdx1P52946 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pdx1P52946 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pdx1P52946 Gm34379-201ENSMUST00000195036 290 ntBASIC10.52□□□□□ -0.73
Pdx1P52946 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.52□□□□□ -0.73
Pdx1P52946 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Pdx1P52946 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pdx1P52946 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pdx1P52946 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.52□□□□□ -0.73
Pdx1P52946 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.52□□□□□ -0.73
Pdx1P52946 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pdx1P52946 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pdx1P52946 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Gm37516-201ENSMUST00000192593 1954 ntBASIC10.52□□□□□ -0.73
Pdx1P52946 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pdx1P52946 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdx1P52946 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.51□□□□□ -0.73
Pdx1P52946 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 Gm14234-201ENSMUST00000119539 845 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 Gm14213-201ENSMUST00000119778 768 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 Gm11980-201ENSMUST00000121445 986 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 Gm24312-201ENSMUST00000178677 119 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Gm5801-201ENSMUST00000182247 780 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pdx1P52946 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Pdx1P52946 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Pdx1P52946 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Pdx1P52946 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.51□□□□□ -0.73
Pdx1P52946 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdx1P52946 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms