Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nkx1-2P42580 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx1-2P42580 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx1-2P42580 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx1-2P42580 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx1-2P42580 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx1-2P42580 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx1-2P42580 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx1-2P42580 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx1-2P42580 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx1-2P42580 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx1-2P42580 Gm29101-201ENSMUST00000188329 1471 ntBASIC13.04□□□□□ -0.32
Nkx1-2P42580 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx1-2P42580 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx1-2P42580 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Gm42833-201ENSMUST00000196019 2124 ntBASIC13.03□□□□□ -0.32
Nkx1-2P42580 Gm44189-201ENSMUST00000204387 3083 ntBASIC13.03□□□□□ -0.32
Nkx1-2P42580 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Gm24398-201ENSMUST00000157870 109 ntBASIC13.03□□□□□ -0.32
Nkx1-2P42580 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Mir7076-201ENSMUST00000183519 74 ntBASIC13.03□□□□□ -0.32
Nkx1-2P42580 Gm29543-201ENSMUST00000188138 967 ntBASIC13.03□□□□□ -0.32
Nkx1-2P42580 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.03□□□□□ -0.32
Nkx1-2P42580 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.03□□□□□ -0.32
Nkx1-2P42580 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx1-2P42580 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx1-2P42580 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC13.02□□□□□ -0.32
Nkx1-2P42580 Fut10-204ENSMUST00000161788 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx1-2P42580 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx1-2P42580 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx1-2P42580 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx1-2P42580 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Nkx1-2P42580 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx1-2P42580 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm4812-201ENSMUST00000182847 993 ntBASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm43097-201ENSMUST00000196867 151 ntBASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm7319-201ENSMUST00000210047 778 ntBASIC13.02□□□□□ -0.33
Nkx1-2P42580 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm7525-201ENSMUST00000219425 454 ntBASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm23680-201ENSMUST00000083162 164 ntBASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm15604-201ENSMUST00000118350 1456 ntBASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx1-2P42580 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx1-2P42580 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx1-2P42580 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx1-2P42580 Gm37307-201ENSMUST00000193663 2621 ntBASIC13.01□□□□□ -0.33
Nkx1-2P42580 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC13.01□□□□□ -0.33
Nkx1-2P42580 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx1-2P42580 Uhrf1-204ENSMUST00000113039 3391 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx1-2P42580 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx1-2P42580 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nkx1-2P42580 Gm26013-201ENSMUST00000104404 119 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms