Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Upk2P38575 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Upk2P38575 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Upk2P38575 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Upk2P38575 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Upk2P38575 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.32□□□□□ -0.92
Upk2P38575 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Upk2P38575 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Upk2P38575 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Upk2P38575 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Upk2P38575 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Gm42858-201ENSMUST00000202512 1704 ntBASIC9.31□□□□□ -0.92
Upk2P38575 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Upk2P38575 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 AC125351.1-201ENSMUST00000221438 2223 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC9.31□□□□□ -0.92
Upk2P38575 Gm15285-201ENSMUST00000119271 473 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Gm11544-201ENSMUST00000120215 382 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Gm13445-201ENSMUST00000121664 307 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Gm12950-201ENSMUST00000121683 417 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC9.31□□□□□ -0.92
Upk2P38575 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Upk2P38575 Gm25830-201ENSMUST00000158923 132 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC9.31□□□□□ -0.92
Upk2P38575 AC238811.4-201ENSMUST00000178019 1246 ntBASIC9.31□□□□□ -0.92
Upk2P38575 AC238940.3-201ENSMUST00000178830 1246 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Gm37390-201ENSMUST00000192452 872 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Gm5543-201ENSMUST00000193329 1091 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Gm8625-201ENSMUST00000194185 1077 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Gm44605-201ENSMUST00000206892 949 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Gm18035-201ENSMUST00000211962 589 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Gm18514-201ENSMUST00000218980 436 ntBASIC9.31□□□□□ -0.92
Upk2P38575 AC102847.1-202ENSMUST00000226313 1245 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Prrxl1-205ENSMUST00000228878 723 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Upk2P38575 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Gm7536-201ENSMUST00000077389 444 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC9.31□□□□□ -0.92
Upk2P38575 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Upk2P38575 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Upk2P38575 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Upk2P38575 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Upk2P38575 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC9.31□□□□□ -0.92
Upk2P38575 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Upk2P38575 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Upk2P38575 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Upk2P38575 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.3□□□□□ -0.92
Upk2P38575 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 Gm45719-201ENSMUST00000207954 1662 ntBASIC9.3□□□□□ -0.92
Upk2P38575 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Upk2P38575 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Upk2P38575 Smok4a-201ENSMUST00000074512 1455 ntBASIC9.3□□□□□ -0.92
Upk2P38575 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Upk2P38575 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.3□□□□□ -0.92
Upk2P38575 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Upk2P38575 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC9.3□□□□□ -0.92
Upk2P38575 Gm14006-201ENSMUST00000122132 981 ntBASIC9.3□□□□□ -0.92
Upk2P38575 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC9.3□□□□□ -0.92
Upk2P38575 Gm16288-201ENSMUST00000137940 367 ntBASIC9.3□□□□□ -0.92
Upk2P38575 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC9.3□□□□□ -0.92
Upk2P38575 Gm25661-201ENSMUST00000157704 296 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms