Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Gm35412-201ENSMUST00000220437 999 ntBASIC16.66■□□□□ 0.26
PtprkP35822 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtprkP35822 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtprkP35822 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtprkP35822 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtprkP35822 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PtprkP35822 Vgll3-202ENSMUST00000227997 1383 ntBASIC16.66■□□□□ 0.26
PtprkP35822 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtprkP35822 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtprkP35822 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC16.66■□□□□ 0.26
PtprkP35822 Gm43860-201ENSMUST00000201742 2705 ntBASIC16.66■□□□□ 0.26
PtprkP35822 Gm15604-201ENSMUST00000118350 1456 ntBASIC16.66■□□□□ 0.26
PtprkP35822 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 Gm43362-201ENSMUST00000198192 2470 ntBASIC16.65■□□□□ 0.26
PtprkP35822 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC16.65■□□□□ 0.26
PtprkP35822 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PtprkP35822 Gm31763-202ENSMUST00000218205 1724 ntBASIC16.65■□□□□ 0.26
PtprkP35822 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 Gm15602-201ENSMUST00000116162 465 ntBASIC16.65■□□□□ 0.26
PtprkP35822 Gm15369-201ENSMUST00000119681 394 ntBASIC16.65■□□□□ 0.26
PtprkP35822 Gm14111-201ENSMUST00000119851 999 ntBASIC16.65■□□□□ 0.26
PtprkP35822 Gm11295-201ENSMUST00000121379 803 ntBASIC16.65■□□□□ 0.26
PtprkP35822 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC16.65■□□□□ 0.26
PtprkP35822 Gm29803-201ENSMUST00000205069 375 ntBASIC16.65■□□□□ 0.26
PtprkP35822 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC16.65■□□□□ 0.26
PtprkP35822 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC16.65■□□□□ 0.26
PtprkP35822 AC116390.1-201ENSMUST00000227975 670 ntBASIC16.65■□□□□ 0.26
PtprkP35822 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 Gm8055-201ENSMUST00000099956 1008 ntBASIC16.65■□□□□ 0.26
PtprkP35822 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PtprkP35822 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC16.65■□□□□ 0.26
PtprkP35822 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtprkP35822 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PtprkP35822 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PtprkP35822 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PtprkP35822 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PtprkP35822 AC154575.1-201ENSMUST00000227166 1474 ntBASIC16.64■□□□□ 0.25
PtprkP35822 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC16.64■□□□□ 0.25
PtprkP35822 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC16.64■□□□□ 0.25
PtprkP35822 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC16.64■□□□□ 0.25
PtprkP35822 Ighv5-10-201ENSMUST00000194591 252 ntBASIC16.64■□□□□ 0.25
PtprkP35822 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC16.64■□□□□ 0.25
PtprkP35822 Gm44936-201ENSMUST00000207324 735 ntBASIC16.64■□□□□ 0.25
PtprkP35822 Gm2981-201ENSMUST00000213947 694 ntBASIC16.64■□□□□ 0.25
PtprkP35822 Figla-201ENSMUST00000032070 759 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PtprkP35822 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PtprkP35822 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PtprkP35822 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Gm5910-201ENSMUST00000211819 1746 ntBASIC16.64■□□□□ 0.25
PtprkP35822 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PtprkP35822 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtprkP35822 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PtprkP35822 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtprkP35822 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PtprkP35822 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PtprkP35822 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtprkP35822 Gm13413-201ENSMUST00000120953 602 ntBASIC16.63■□□□□ 0.25
PtprkP35822 Gm37012-201ENSMUST00000194991 1078 ntBASIC16.63■□□□□ 0.25
PtprkP35822 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC16.63■□□□□ 0.25
PtprkP35822 AC113282.4-201ENSMUST00000225273 903 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PtprkP35822 AC154506.2-201ENSMUST00000225481 1276 ntBASIC16.63■□□□□ 0.25
PtprkP35822 AC140393.4-201ENSMUST00000226994 765 ntBASIC16.63■□□□□ 0.25
PtprkP35822 AC140426.1-201ENSMUST00000227933 459 ntBASIC16.63■□□□□ 0.25
PtprkP35822 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PtprkP35822 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PtprkP35822 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC16.63■□□□□ 0.25
PtprkP35822 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtprkP35822 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtprkP35822 Gm5310-201ENSMUST00000197861 1511 ntBASIC16.63■□□□□ 0.25
PtprkP35822 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PtprkP35822 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtprkP35822 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtprkP35822 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtprkP35822 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms