Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm43737-201ENSMUST00000199915 2740 ntBASIC8.85□□□□□ -0.99
CfdP03953 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Ash2l-203ENSMUST00000110609 2300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Gm9866-205ENSMUST00000220998 1973 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC8.85□□□□□ -0.99
CfdP03953 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Gm13809-201ENSMUST00000117921 597 ntBASIC8.85□□□□□ -0.99
CfdP03953 Tspan2-202ENSMUST00000119902 961 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC8.85□□□□□ -0.99
CfdP03953 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC8.85□□□□□ -0.99
CfdP03953 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CfdP03953 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC8.85□□□□□ -0.99
CfdP03953 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
CfdP03953 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC8.85□□□□□ -0.99
CfdP03953 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC8.85□□□□□ -0.99
CfdP03953 Gm37259-201ENSMUST00000193903 849 ntBASIC8.85□□□□□ -0.99
CfdP03953 Gm5869-201ENSMUST00000200248 1257 ntBASIC8.85□□□□□ -0.99
CfdP03953 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC8.85□□□□□ -0.99
CfdP03953 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC8.85□□□□□ -0.99
CfdP03953 CT573034.1-201ENSMUST00000222983 313 ntBASIC8.85□□□□□ -0.99
CfdP03953 AC154431.1-201ENSMUST00000224910 880 ntBASIC8.85□□□□□ -0.99
CfdP03953 5430437J10Rik-202ENSMUST00000227355 634 ntBASIC8.85□□□□□ -0.99
CfdP03953 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Ntng1-201ENSMUST00000051253 327 ntBASIC8.85□□□□□ -0.99
CfdP03953 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Gm42633-201ENSMUST00000198853 2764 ntBASIC8.85□□□□□ -0.99
CfdP03953 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Lsm6-203ENSMUST00000130325 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Ighg3-202ENSMUST00000223179 2414 ntAPPRIS P5 BASIC8.85□□□□□ -0.99
CfdP03953 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Tmprss13-201ENSMUST00000034597 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Gm19027-201ENSMUST00000187291 1355 ntBASIC8.85□□□□□ -0.99
CfdP03953 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Gm44067-201ENSMUST00000203350 2971 ntTSL 5 BASIC8.85□□□□□ -0.99
CfdP03953 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CfdP03953 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CfdP03953 Gm9978-201ENSMUST00000069431 3273 ntBASIC8.85□□□□□ -0.99
CfdP03953 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 AC159819.3-201ENSMUST00000216940 1837 ntBASIC8.84□□□□□ -0.99
CfdP03953 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC8.84□□□□□ -0.99
CfdP03953 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Mbnl1-203ENSMUST00000191747 4046 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
CfdP03953 Tnxa-201ENSMUST00000173277 2975 ntBASIC8.84□□□□□ -0.99
CfdP03953 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
CfdP03953 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC8.84□□□□□ -0.99
CfdP03953 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
CfdP03953 Gm12742-201ENSMUST00000117326 410 ntBASIC8.84□□□□□ -0.99
CfdP03953 Gm7851-201ENSMUST00000117574 323 ntBASIC8.84□□□□□ -0.99
CfdP03953 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC8.84□□□□□ -0.99
CfdP03953 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
CfdP03953 Gm7583-201ENSMUST00000182941 1005 ntBASIC8.84□□□□□ -0.99
CfdP03953 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC8.84□□□□□ -0.99
CfdP03953 Gm38266-201ENSMUST00000194931 421 ntBASIC8.84□□□□□ -0.99
CfdP03953 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC8.84□□□□□ -0.99
CfdP03953 Gm9678-201ENSMUST00000198979 1149 ntBASIC8.84□□□□□ -0.99
CfdP03953 Gm5130-201ENSMUST00000210233 959 ntBASIC8.84□□□□□ -0.99
CfdP03953 AC159308.2-201ENSMUST00000213592 2325 ntBASIC8.84□□□□□ -0.99
CfdP03953 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC8.84□□□□□ -0.99
CfdP03953 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
CfdP03953 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC8.84□□□□□ -0.99
CfdP03953 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CfdP03953 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC8.84□□□□□ -0.99
CfdP03953 Gm17383-201ENSMUST00000078739 1041 ntBASIC8.84□□□□□ -0.99
CfdP03953 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms