Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Hmgb3O54879 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Hmgb3O54879 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Hmgb3O54879 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Hmgb3O54879 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Gm21115-201ENSMUST00000187565 2578 ntBASIC8.73□□□□□ -1.01
Hmgb3O54879 AC154220.1-201ENSMUST00000225033 1705 ntBASIC8.73□□□□□ -1.01
Hmgb3O54879 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
Hmgb3O54879 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Gm19165-201ENSMUST00000204453 1982 ntBASIC8.73□□□□□ -1.01
Hmgb3O54879 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Hmgb3O54879 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC8.73□□□□□ -1.01
Hmgb3O54879 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC8.73□□□□□ -1.01
Hmgb3O54879 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Hmgb3O54879 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb3O54879 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Cdh18-207ENSMUST00000226693 2165 ntBASIC8.72□□□□□ -1.01
Hmgb3O54879 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 AC160340.2-201ENSMUST00000220812 3675 ntBASIC8.72□□□□□ -1.01
Hmgb3O54879 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Gm10782-202ENSMUST00000223775 1480 ntBASIC8.72□□□□□ -1.01
Hmgb3O54879 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC8.72□□□□□ -1.01
Hmgb3O54879 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Gm37666-201ENSMUST00000194110 866 ntBASIC8.72□□□□□ -1.01
Hmgb3O54879 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Gm13097-201ENSMUST00000210722 397 ntBASIC8.72□□□□□ -1.01
Hmgb3O54879 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Hmgb3O54879 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC8.72□□□□□ -1.01
Hmgb3O54879 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmgb3O54879 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Hmgb3O54879 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC8.71□□□□□ -1.01
Hmgb3O54879 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Egflam-201ENSMUST00000058593 4778 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Hmgb3O54879 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Hmgb3O54879 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Hmgb3O54879 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
Hmgb3O54879 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm5940-201ENSMUST00000117582 1068 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm12218-201ENSMUST00000117666 399 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm13665-201ENSMUST00000120830 528 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm12196-201ENSMUST00000120954 262 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms