Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 AC140293.1-201ENSMUST00000225626 1247 ntBASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 AC154849.3-201ENSMUST00000223733 1660 ntBASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sec61a2Q9JLR1 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Mir1896-201ENSMUST00000122641 81 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm16165-201ENSMUST00000160140 795 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm25072-201ENSMUST00000175233 235 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm6407-201ENSMUST00000176468 549 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm17798-201ENSMUST00000182282 1035 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm45219-201ENSMUST00000205602 465 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Prrxl1-205ENSMUST00000228878 723 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sec61a2Q9JLR1 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms