Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otud1Q9CUB6 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Otud1Q9CUB6 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otud1Q9CUB6 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Otud1Q9CUB6 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Otud1Q9CUB6 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.35□□□□□ -0.75
Otud1Q9CUB6 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Otud1Q9CUB6 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otud1Q9CUB6 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Otud1Q9CUB6 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otud1Q9CUB6 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm12591-201ENSMUST00000122407 1177 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm42438-201ENSMUST00000197832 974 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm42452-201ENSMUST00000199749 617 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm6423-201ENSMUST00000204315 934 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm18035-201ENSMUST00000211962 589 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm6390-201ENSMUST00000215034 589 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm18871-201ENSMUST00000218655 745 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 AC154484.1-201ENSMUST00000227311 771 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm7536-201ENSMUST00000077389 444 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Mir483-201ENSMUST00000093631 73 ntBASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Otud1Q9CUB6 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.75
Otud1Q9CUB6 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Gfra2-203ENSMUST00000227697 1323 ntBASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Gm14975-201ENSMUST00000118741 664 ntBASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Gm11340-201ENSMUST00000119226 412 ntBASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.33□□□□□ -0.76
Otud1Q9CUB6 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Otud1Q9CUB6 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms