Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Gm12217-201ENSMUST00000118858 696 ntBASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Gm13498-201ENSMUST00000119159 2166 ntBASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Gm25343-201ENSMUST00000157460 107 ntBASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Gm23699-201ENSMUST00000158835 135 ntBASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Gm21092-201ENSMUST00000178995 955 ntBASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Gm37826-201ENSMUST00000195329 322 ntBASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Id2-203ENSMUST00000222667 958 ntBASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Dcx-204ENSMUST00000112856 1333 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lysmd4Q8CC84 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gm12997-201ENSMUST00000120207 640 ntBASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gm7583-201ENSMUST00000182941 1005 ntBASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Mir8115-201ENSMUST00000184992 119 ntBASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gm37390-201ENSMUST00000192452 872 ntBASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gm5130-201ENSMUST00000210233 959 ntBASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gm42521-201ENSMUST00000199190 2040 ntBASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC9.51□□□□□ -0.89
Lysmd4Q8CC84 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms