Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.37□□□□□ -0.43
Nup98Q6PFD9 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup98Q6PFD9 Gm14699-201ENSMUST00000122340 228 ntBASIC12.37□□□□□ -0.43
Nup98Q6PFD9 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup98Q6PFD9 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC12.37□□□□□ -0.43
Nup98Q6PFD9 Gm38004-201ENSMUST00000192972 357 ntBASIC12.37□□□□□ -0.43
Nup98Q6PFD9 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC12.37□□□□□ -0.43
Nup98Q6PFD9 Gm3945-201ENSMUST00000196637 683 ntBASIC12.37□□□□□ -0.43
Nup98Q6PFD9 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC12.37□□□□□ -0.43
Nup98Q6PFD9 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC12.37□□□□□ -0.43
Nup98Q6PFD9 Gm25483-201ENSMUST00000083224 227 ntBASIC12.37□□□□□ -0.43
Nup98Q6PFD9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Gm7052-201ENSMUST00000167568 1512 ntBASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Gm8809-201ENSMUST00000119367 743 ntBASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Gm4775-201ENSMUST00000169588 402 ntBASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Gm44131-201ENSMUST00000203036 394 ntBASIC12.36□□□□□ -0.43
Nup98Q6PFD9 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 AC156274.1-201ENSMUST00000219193 634 ntBASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup98Q6PFD9 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm13286-201ENSMUST00000117750 537 ntBASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm14654-201ENSMUST00000118620 447 ntBASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm13498-201ENSMUST00000119159 2166 ntBASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm15285-201ENSMUST00000119271 473 ntBASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm12254-201ENSMUST00000134617 471 ntBASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm16008-203ENSMUST00000181389 480 ntTSL 3 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm8707-201ENSMUST00000183325 980 ntBASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm3052-201ENSMUST00000186409 829 ntBASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC12.35□□□□□ -0.43
Nup98Q6PFD9 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Mettl8-204ENSMUST00000112186 2347 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Ppp1r9a-206ENSMUST00000175962 3769 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 AA474408-201ENSMUST00000098110 3339 ntBASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup98Q6PFD9 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 AC114585.2-201ENSMUST00000227693 486 ntBASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nup98Q6PFD9 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms