Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm16288-201ENSMUST00000137940 367 ntBASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm4812-201ENSMUST00000182847 993 ntBASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm42710-201ENSMUST00000200608 985 ntBASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm44605-201ENSMUST00000206892 949 ntBASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.43□□□□□ -0.58
Upf3bQ3ULL6 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Gm22876-201ENSMUST00000175450 298 ntBASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Gm29155-201ENSMUST00000185910 269 ntBASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Gm43912-201ENSMUST00000204352 538 ntBASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Gm5881-201ENSMUST00000204737 367 ntBASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Upf3bQ3ULL6 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Gm12337-201ENSMUST00000119634 400 ntBASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upf3bQ3ULL6 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms