Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Trim43aQ3TL54 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Gm12516-201ENSMUST00000120819 385 ntBASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.29□□□□□ -0.6
Trim43aQ3TL54 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim43aQ3TL54 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gm10748-202ENSMUST00000194396 2379 ntBASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gm13888-201ENSMUST00000119148 422 ntBASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gm6407-201ENSMUST00000176468 549 ntBASIC11.28□□□□□ -0.6
Trim43aQ3TL54 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gm37020-201ENSMUST00000195303 992 ntBASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim43aQ3TL54 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim43aQ3TL54 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Trim43aQ3TL54 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms