Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
GabpaQ00422 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.1□□□□□ -0.47
GabpaQ00422 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Gm12337-201ENSMUST00000119634 400 ntBASIC12.1□□□□□ -0.47
GabpaQ00422 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC12.1□□□□□ -0.47
GabpaQ00422 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC12.1□□□□□ -0.47
GabpaQ00422 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
GabpaQ00422 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.1□□□□□ -0.47
GabpaQ00422 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.1□□□□□ -0.47
GabpaQ00422 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
GabpaQ00422 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC12.1□□□□□ -0.47
GabpaQ00422 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.1□□□□□ -0.47
GabpaQ00422 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.1□□□□□ -0.47
GabpaQ00422 AC140314.1-201ENSMUST00000219549 554 ntBASIC12.1□□□□□ -0.47
GabpaQ00422 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.1□□□□□ -0.47
GabpaQ00422 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC12.1□□□□□ -0.47
GabpaQ00422 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC12.1□□□□□ -0.47
GabpaQ00422 AC154431.1-201ENSMUST00000224910 880 ntBASIC12.1□□□□□ -0.47
GabpaQ00422 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.1□□□□□ -0.47
GabpaQ00422 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.1□□□□□ -0.47
GabpaQ00422 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
GabpaQ00422 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GabpaQ00422 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.1□□□□□ -0.47
GabpaQ00422 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.1□□□□□ -0.47
GabpaQ00422 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
GabpaQ00422 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Gm21142-201ENSMUST00000179999 2604 ntBASIC12.09□□□□□ -0.47
GabpaQ00422 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
GabpaQ00422 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
GabpaQ00422 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.09□□□□□ -0.47
GabpaQ00422 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
GabpaQ00422 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.09□□□□□ -0.47
GabpaQ00422 Gm14148-201ENSMUST00000122433 1008 ntBASIC12.09□□□□□ -0.47
GabpaQ00422 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Gm26943-201ENSMUST00000182295 957 ntBASIC12.09□□□□□ -0.47
GabpaQ00422 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC12.09□□□□□ -0.47
GabpaQ00422 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.09□□□□□ -0.47
GabpaQ00422 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC12.09□□□□□ -0.47
GabpaQ00422 Gm3791-201ENSMUST00000220790 768 ntBASIC12.09□□□□□ -0.47
GabpaQ00422 AC133496.1-201ENSMUST00000223891 743 ntBASIC12.09□□□□□ -0.47
GabpaQ00422 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
GabpaQ00422 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
GabpaQ00422 Gm43625-201ENSMUST00000199177 1539 ntBASIC12.09□□□□□ -0.47
GabpaQ00422 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.09□□□□□ -0.47
GabpaQ00422 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
GabpaQ00422 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.09□□□□□ -0.47
GabpaQ00422 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GabpaQ00422 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
GabpaQ00422 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
GabpaQ00422 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC12.08□□□□□ -0.47
GabpaQ00422 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
GabpaQ00422 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
GabpaQ00422 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.08□□□□□ -0.48
GabpaQ00422 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
GabpaQ00422 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.08□□□□□ -0.48
GabpaQ00422 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.08□□□□□ -0.48
GabpaQ00422 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
GabpaQ00422 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.08□□□□□ -0.48
GabpaQ00422 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC12.08□□□□□ -0.48
GabpaQ00422 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC12.08□□□□□ -0.48
GabpaQ00422 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms