Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC13.4□□□□□ -0.26
Smarcc1P97496 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.4□□□□□ -0.26
Smarcc1P97496 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smarcc1P97496 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Smarcc1P97496 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.4□□□□□ -0.27
Smarcc1P97496 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Smarcc1P97496 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smarcc1P97496 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Smarcc1P97496 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC13.39□□□□□ -0.27
Smarcc1P97496 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC13.39□□□□□ -0.27
Smarcc1P97496 Gm8864-201ENSMUST00000118653 1010 ntBASIC13.39□□□□□ -0.27
Smarcc1P97496 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smarcc1P97496 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC13.39□□□□□ -0.27
Smarcc1P97496 Gm5766-202ENSMUST00000161633 799 ntBASIC13.39□□□□□ -0.27
Smarcc1P97496 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Smarcc1P97496 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Gm5291-201ENSMUST00000201965 899 ntBASIC13.39□□□□□ -0.27
Smarcc1P97496 Gm6859-201ENSMUST00000218614 989 ntBASIC13.39□□□□□ -0.27
Smarcc1P97496 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC13.39□□□□□ -0.27
Smarcc1P97496 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Smarcc1P97496 Gm26440-201ENSMUST00000082591 129 ntBASIC13.39□□□□□ -0.27
Smarcc1P97496 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.39□□□□□ -0.27
Smarcc1P97496 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC13.39□□□□□ -0.27
Smarcc1P97496 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Smarcc1P97496 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcc1P97496 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.39□□□□□ -0.27
Smarcc1P97496 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Gm24470-201ENSMUST00000104486 132 ntBASIC13.38□□□□□ -0.27
Smarcc1P97496 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Gm7781-201ENSMUST00000117258 788 ntBASIC13.38□□□□□ -0.27
Smarcc1P97496 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC13.38□□□□□ -0.27
Smarcc1P97496 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Gm20474-201ENSMUST00000180089 596 ntBASIC13.38□□□□□ -0.27
Smarcc1P97496 Gm28916-201ENSMUST00000186988 699 ntBASIC13.38□□□□□ -0.27
Smarcc1P97496 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc1P97496 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smarcc1P97496 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm9095-201ENSMUST00000117607 881 ntBASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms