Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC8.92□□□□□ -0.98
Npas1P97459 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Gm2965-201ENSMUST00000198365 343 ntBASIC8.92□□□□□ -0.98
Npas1P97459 Gm5869-201ENSMUST00000200248 1257 ntBASIC8.92□□□□□ -0.98
Npas1P97459 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC8.92□□□□□ -0.98
Npas1P97459 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC8.92□□□□□ -0.98
Npas1P97459 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC8.92□□□□□ -0.98
Npas1P97459 Gm8342-201ENSMUST00000209839 757 ntBASIC8.92□□□□□ -0.98
Npas1P97459 Gm6082-201ENSMUST00000215204 454 ntBASIC8.92□□□□□ -0.98
Npas1P97459 CT025602.2-201ENSMUST00000226553 772 ntBASIC8.92□□□□□ -0.98
Npas1P97459 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Npas1P97459 Plk4-201ENSMUST00000026858 3479 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Nadsyn1-201ENSMUST00000033415 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Npas1P97459 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC8.92□□□□□ -0.98
Npas1P97459 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC8.92□□□□□ -0.98
Npas1P97459 Slc25a44-201ENSMUST00000057935 3577 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Acox3-201ENSMUST00000068563 3386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Npas1P97459 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC8.91□□□□□ -0.98
Npas1P97459 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Plcd4-201ENSMUST00000027362 2977 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Mmel1-201ENSMUST00000079269 2934 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Ctage5-220ENSMUST00000177225 2872 ntTSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Gm43152-201ENSMUST00000202495 1638 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Inpp4a-207ENSMUST00000136846 3576 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Npas1P97459 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Ncaph2-203ENSMUST00000088717 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 AC154355.1-201ENSMUST00000224604 2162 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC8.91□□□□□ -0.98
Npas1P97459 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Gm11941-201ENSMUST00000119904 610 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Gm13263-201ENSMUST00000121271 838 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC8.91□□□□□ -0.98
Npas1P97459 Gm7584-201ENSMUST00000175829 940 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Gm27441-201ENSMUST00000185000 105 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Gm37301-201ENSMUST00000195412 568 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Gm43058-201ENSMUST00000197645 625 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC8.91□□□□□ -0.98
Npas1P97459 Gm6108-201ENSMUST00000208365 367 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC8.91□□□□□ -0.98
Npas1P97459 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Sfmbt1-202ENSMUST00000112184 2936 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Stard13-208ENSMUST00000202111 3373 ntTSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Gm20796-201ENSMUST00000180355 5838 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC8.91□□□□□ -0.98
Npas1P97459 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 Gm43481-201ENSMUST00000201715 3672 ntBASIC8.91□□□□□ -0.98
Npas1P97459 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Npas1P97459 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC8.9□□□□□ -0.98
Npas1P97459 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC8.9□□□□□ -0.98
Npas1P97459 Dhx32-202ENSMUST00000063669 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Npas1P97459 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Npas1P97459 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Npas1P97459 Nupl1-201ENSMUST00000225805 3602 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Npas1P97459 Gm37806-201ENSMUST00000194524 6387 ntBASIC8.9□□□□□ -0.98
Npas1P97459 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Npas1P97459 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Npas1P97459 Gm37302-201ENSMUST00000192958 2998 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms