Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Gm8864-201ENSMUST00000118653 1010 ntBASIC13.4□□□□□ -0.26
Nkx2-3P97334 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Gm38170-201ENSMUST00000195404 816 ntBASIC13.4□□□□□ -0.26
Nkx2-3P97334 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 AC161877.1-201ENSMUST00000227736 699 ntBASIC13.4□□□□□ -0.26
Nkx2-3P97334 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-3P97334 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nkx2-3P97334 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Nkx2-3P97334 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Gm26356-201ENSMUST00000158217 283 ntBASIC13.39□□□□□ -0.27
Nkx2-3P97334 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Gm7672-201ENSMUST00000180915 872 ntBASIC13.39□□□□□ -0.27
Nkx2-3P97334 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 CT025689.5-201ENSMUST00000224316 986 ntBASIC13.39□□□□□ -0.27
Nkx2-3P97334 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Gm7823-201ENSMUST00000120761 1623 ntBASIC13.39□□□□□ -0.27
Nkx2-3P97334 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-3P97334 Gm10344-201ENSMUST00000193498 1419 ntBASIC13.39□□□□□ -0.27
Nkx2-3P97334 Gm18719-201ENSMUST00000196696 1413 ntBASIC13.39□□□□□ -0.27
Nkx2-3P97334 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-3P97334 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx2-3P97334 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-3P97334 Gm43221-201ENSMUST00000197612 2071 ntBASIC13.38□□□□□ -0.27
Nkx2-3P97334 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-3P97334 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nkx2-3P97334 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-3P97334 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-3P97334 Gm11427-201ENSMUST00000117952 1696 ntBASIC13.38□□□□□ -0.27
Nkx2-3P97334 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nkx2-3P97334 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx2-3P97334 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-3P97334 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms