Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SgcbP82349 Mir7035-201ENSMUST00000184713 82 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC9.64□□□□□ -0.87
SgcbP82349 Gm33080-201ENSMUST00000205429 172 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.64□□□□□ -0.87
SgcbP82349 AC153936.1-201ENSMUST00000219874 395 ntBASIC9.64□□□□□ -0.87
SgcbP82349 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.64□□□□□ -0.87
SgcbP82349 AC154184.3-201ENSMUST00000225620 1090 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Gm26670-202ENSMUST00000226862 340 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SgcbP82349 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.64□□□□□ -0.87
SgcbP82349 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SgcbP82349 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
SgcbP82349 Gm37806-201ENSMUST00000194524 6387 ntBASIC9.64□□□□□ -0.87
SgcbP82349 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.64□□□□□ -0.87
SgcbP82349 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC9.64□□□□□ -0.87
SgcbP82349 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
SgcbP82349 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Gm42462-201ENSMUST00000196543 1363 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.63□□□□□ -0.87
SgcbP82349 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC9.63□□□□□ -0.87
SgcbP82349 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Gm9372-201ENSMUST00000168454 430 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SgcbP82349 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SgcbP82349 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Gm3671-201ENSMUST00000182463 1007 ntBASIC9.63□□□□□ -0.87
SgcbP82349 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Gm29288-201ENSMUST00000191582 901 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Gm38280-201ENSMUST00000192610 158 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Gm38384-201ENSMUST00000195413 1122 ntBASIC9.63□□□□□ -0.87
SgcbP82349 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.63□□□□□ -0.87
SgcbP82349 Gm19166-201ENSMUST00000196041 1063 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 AC129597.1-201ENSMUST00000223046 1234 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SgcbP82349 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SgcbP82349 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SgcbP82349 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SgcbP82349 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SgcbP82349 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
SgcbP82349 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.63□□□□□ -0.87
SgcbP82349 AC122881.1-201ENSMUST00000225757 2695 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.63□□□□□ -0.87
SgcbP82349 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SgcbP82349 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms