Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.12□□□□□ -0.79
Nup43P59235 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC10.12□□□□□ -0.79
Nup43P59235 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.12□□□□□ -0.79
Nup43P59235 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Nup43P59235 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.12□□□□□ -0.79
Nup43P59235 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.12□□□□□ -0.79
Nup43P59235 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nup43P59235 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.12□□□□□ -0.79
Nup43P59235 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nup43P59235 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.12□□□□□ -0.79
Nup43P59235 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nup43P59235 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Nup43P59235 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Nup43P59235 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Nup43P59235 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Nup43P59235 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Nup43P59235 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Gm44863-201ENSMUST00000207613 1422 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Gm16288-201ENSMUST00000137940 367 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.11□□□□□ -0.79
Nup43P59235 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Gm4812-201ENSMUST00000182847 993 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Gm38216-201ENSMUST00000194872 1214 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Gm42710-201ENSMUST00000200608 985 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Gm5881-201ENSMUST00000204737 367 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Gm44605-201ENSMUST00000206892 949 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Nup43P59235 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup43P59235 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.11□□□□□ -0.79
Nup43P59235 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.1□□□□□ -0.79
Nup43P59235 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nup43P59235 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.1□□□□□ -0.79
Nup43P59235 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.1□□□□□ -0.79
Nup43P59235 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.1□□□□□ -0.79
Nup43P59235 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nup43P59235 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Nup43P59235 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms