Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps33bP59016 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps33bP59016 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Vps33bP59016 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
Vps33bP59016 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps33bP59016 AC123738.2-201ENSMUST00000223791 1899 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Mbtd1-206ENSMUST00000107854 5232 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Gm14021-201ENSMUST00000117683 961 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 Gm11686-201ENSMUST00000122397 333 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps33bP59016 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Gm5652-201ENSMUST00000182336 1008 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Gm37301-201ENSMUST00000195412 568 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC13.36□□□□□ -0.27
Vps33bP59016 Gm44139-201ENSMUST00000204903 373 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 Gm29803-201ENSMUST00000205069 375 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC13.36□□□□□ -0.27
Vps33bP59016 AC153948.2-201ENSMUST00000218112 505 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 Gm8256-202ENSMUST00000227964 828 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 Figla-201ENSMUST00000032070 759 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 1810009J06Rik-201ENSMUST00000076638 882 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Gm10689-201ENSMUST00000098864 432 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps33bP59016 4933436P19Rik-201ENSMUST00000217736 1442 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Vps33bP59016 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.36□□□□□ -0.27
Vps33bP59016 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps33bP59016 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Vps33bP59016 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vps33bP59016 Gm43165-201ENSMUST00000200842 1635 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Vps33bP59016 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Gm13623-201ENSMUST00000118359 625 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 Gm5054-201ENSMUST00000119351 453 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 Gm15798-201ENSMUST00000120082 408 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 Defa-ps16-201ENSMUST00000121939 171 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC13.35□□□□□ -0.27
Vps33bP59016 BC002189-201ENSMUST00000195674 598 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 Gm18894-201ENSMUST00000198794 694 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 Gm3198-201ENSMUST00000208725 1026 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 Gm29783-201ENSMUST00000219398 369 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps33bP59016 AC157650.1-201ENSMUST00000224582 610 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 AC156016.4-201ENSMUST00000227470 647 ntBASIC13.35□□□□□ -0.27
Vps33bP59016 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC13.35□□□□□ -0.27
Vps33bP59016 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vps33bP59016 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vps33bP59016 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps33bP59016 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vps33bP59016 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps33bP59016 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps33bP59016 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps33bP59016 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps33bP59016 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Vps33bP59016 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Vps33bP59016 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps33bP59016 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps33bP59016 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps33bP59016 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms