Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Gm17391-201ENSMUST00000171036 126 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 Gm8197-202ENSMUST00000193422 934 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.63□□□□□ -0.87
Rfx3P48381 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.63□□□□□ -0.87
Rfx3P48381 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Gm44545-201ENSMUST00000208262 746 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.63□□□□□ -0.87
Rfx3P48381 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.63□□□□□ -0.87
Rfx3P48381 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC9.63□□□□□ -0.87
Rfx3P48381 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Rfx3P48381 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rfx3P48381 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC9.62□□□□□ -0.87
Rfx3P48381 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Rfx3P48381 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm44999-201ENSMUST00000207456 1493 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm12663-201ENSMUST00000118481 958 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.62□□□□□ -0.87
Rfx3P48381 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm16165-201ENSMUST00000160140 795 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm2875-201ENSMUST00000211333 360 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 AC166992.1-201ENSMUST00000216356 565 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC9.62□□□□□ -0.87
Rfx3P48381 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm25580-201ENSMUST00000083409 327 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Rfx3P48381 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Rfx3P48381 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Rfx3P48381 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.62□□□□□ -0.87
Rfx3P48381 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.62□□□□□ -0.87
Rfx3P48381 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.62□□□□□ -0.87
Rfx3P48381 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.62□□□□□ -0.87
Rfx3P48381 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms