Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 Gm15264-201ENSMUST00000118050 502 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 Gm15815-201ENSMUST00000120569 255 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 Gm11701-201ENSMUST00000121277 1142 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 Gm13792-201ENSMUST00000121350 423 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.24□□□□□ -0.45
Vcam1P29533 Gm16305-201ENSMUST00000140747 556 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vcam1P29533 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Gm37597-201ENSMUST00000191853 382 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Gm42511-201ENSMUST00000196160 234 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 Gm6069-201ENSMUST00000196501 463 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC12.24□□□□□ -0.45
Vcam1P29533 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC12.24□□□□□ -0.45
Vcam1P29533 Gm19090-201ENSMUST00000218187 774 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.24□□□□□ -0.45
Vcam1P29533 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Vcam1P29533 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vcam1P29533 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Gm4778-201ENSMUST00000098878 1098 ntBASIC12.24□□□□□ -0.45
Vcam1P29533 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vcam1P29533 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Vcam1P29533 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.24□□□□□ -0.45
Vcam1P29533 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vcam1P29533 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vcam1P29533 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.23□□□□□ -0.45
Vcam1P29533 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.23□□□□□ -0.45
Vcam1P29533 Gm14650-201ENSMUST00000120400 889 ntBASIC12.23□□□□□ -0.45
Vcam1P29533 Mir1896-201ENSMUST00000122641 81 ntBASIC12.23□□□□□ -0.45
Vcam1P29533 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC12.23□□□□□ -0.45
Vcam1P29533 Gm23081-201ENSMUST00000157845 297 ntBASIC12.23□□□□□ -0.45
Vcam1P29533 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 Gm4812-201ENSMUST00000182847 993 ntBASIC12.23□□□□□ -0.45
Vcam1P29533 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vcam1P29533 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC12.23□□□□□ -0.45
Vcam1P29533 AC165260.2-201ENSMUST00000225371 395 ntBASIC12.23□□□□□ -0.45
Vcam1P29533 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.23□□□□□ -0.45
Vcam1P29533 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.23□□□□□ -0.45
Vcam1P29533 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vcam1P29533 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vcam1P29533 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vcam1P29533 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vcam1P29533 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vcam1P29533 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vcam1P29533 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vcam1P29533 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vcam1P29533 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.22□□□□□ -0.45
Vcam1P29533 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vcam1P29533 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vcam1P29533 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vcam1P29533 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vcam1P29533 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vcam1P29533 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vcam1P29533 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms