Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Pde6aP27664 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pde6aP27664 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pde6aP27664 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC12.36□□□□□ -0.43
Pde6aP27664 Gm22344-201ENSMUST00000122642 278 ntBASIC12.36□□□□□ -0.43
Pde6aP27664 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC12.36□□□□□ -0.43
Pde6aP27664 Gm9162-201ENSMUST00000182081 991 ntBASIC12.36□□□□□ -0.43
Pde6aP27664 Gm28671-201ENSMUST00000187036 692 ntBASIC12.36□□□□□ -0.43
Pde6aP27664 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.36□□□□□ -0.43
Pde6aP27664 Gm19566-201ENSMUST00000199576 610 ntBASIC12.36□□□□□ -0.43
Pde6aP27664 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Gm35713-201ENSMUST00000210516 199 ntBASIC12.36□□□□□ -0.43
Pde6aP27664 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.36□□□□□ -0.43
Pde6aP27664 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pde6aP27664 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pde6aP27664 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.36□□□□□ -0.43
Pde6aP27664 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.36□□□□□ -0.43
Pde6aP27664 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pde6aP27664 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Pde6aP27664 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC12.35□□□□□ -0.43
Pde6aP27664 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pde6aP27664 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pde6aP27664 Mir291b-201ENSMUST00000104838 79 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 Gm14993-201ENSMUST00000121180 164 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Pde6aP27664 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC12.35□□□□□ -0.43
Pde6aP27664 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pde6aP27664 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.35□□□□□ -0.43
Pde6aP27664 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.35□□□□□ -0.43
Pde6aP27664 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pde6aP27664 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Gm27440-201ENSMUST00000184785 107 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 Gm8022-201ENSMUST00000191763 904 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 Gm42751-201ENSMUST00000198065 559 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 Gm45310-201ENSMUST00000210436 275 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC12.35□□□□□ -0.43
Pde6aP27664 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 Gm26782-203ENSMUST00000227103 751 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Atf7-201ENSMUST00000096143 390 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Gm32914-201ENSMUST00000203815 2228 ntBASIC12.35□□□□□ -0.43
Pde6aP27664 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pde6aP27664 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6aP27664 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pde6aP27664 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pde6aP27664 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6aP27664 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6aP27664 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6aP27664 Gm15604-201ENSMUST00000118350 1456 ntBASIC12.34□□□□□ -0.43
Pde6aP27664 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6aP27664 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6aP27664 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pde6aP27664 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6aP27664 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6aP27664 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6aP27664 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6aP27664 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6aP27664 Gm24791-201ENSMUST00000104284 131 ntBASIC12.34□□□□□ -0.43
Pde6aP27664 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.34□□□□□ -0.43
Pde6aP27664 Gm11475-201ENSMUST00000118482 476 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms