Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Col8a2P25318 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Gm43622-201ENSMUST00000200140 2019 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Gm42970-201ENSMUST00000196407 1352 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 AC154314.2-201ENSMUST00000223677 3502 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Col8a2P25318 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC8.9□□□□□ -0.98
Col8a2P25318 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Gm12397-201ENSMUST00000117674 615 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Gm13688-201ENSMUST00000121557 608 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Gm13857-201ENSMUST00000139645 173 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Gm9916-201ENSMUST00000192943 1228 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Gm5543-201ENSMUST00000193329 1091 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Col8a2P25318 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Gm6855-201ENSMUST00000206307 790 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Gm7319-201ENSMUST00000210047 778 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Gm45893-201ENSMUST00000211899 247 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC8.9□□□□□ -0.98
Col8a2P25318 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC8.9□□□□□ -0.98
Col8a2P25318 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC8.9□□□□□ -0.98
Col8a2P25318 Gm40879-201ENSMUST00000220759 612 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC8.9□□□□□ -0.98
Col8a2P25318 Gm25125-201ENSMUST00000083340 136 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 n-R5s71-201ENSMUST00000093668 119 ntBASIC8.9□□□□□ -0.98
Col8a2P25318 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Col8a2P25318 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Col8a2P25318 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Col8a2P25318 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC8.9□□□□□ -0.98
Col8a2P25318 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC8.9□□□□□ -0.98
Col8a2P25318 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col8a2P25318 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Col8a2P25318 Klf10-203ENSMUST00000227920 2144 ntBASIC8.9□□□□□ -0.99
Col8a2P25318 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Col8a2P25318 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Col8a2P25318 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Col8a2P25318 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Col8a2P25318 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Col8a2P25318 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Col8a2P25318 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
Col8a2P25318 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Col8a2P25318 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Col8a2P25318 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Col8a2P25318 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Col8a2P25318 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Prss23os-202ENSMUST00000179361 1362 ntBASIC8.89□□□□□ -0.99
Col8a2P25318 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Col8a2P25318 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Col8a2P25318 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC8.89□□□□□ -0.99
Col8a2P25318 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC8.89□□□□□ -0.99
Col8a2P25318 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC8.89□□□□□ -0.99
Col8a2P25318 Gm8152-201ENSMUST00000120842 637 ntBASIC8.89□□□□□ -0.99
Col8a2P25318 Gm6425-201ENSMUST00000136332 790 ntBASIC8.89□□□□□ -0.99
Col8a2P25318 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC8.89□□□□□ -0.99
Col8a2P25318 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Gm25998-201ENSMUST00000175397 53 ntBASIC8.89□□□□□ -0.99
Col8a2P25318 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Gm5801-201ENSMUST00000182247 780 ntBASIC8.89□□□□□ -0.99
Col8a2P25318 Gm27441-201ENSMUST00000185000 105 ntBASIC8.89□□□□□ -0.99
Col8a2P25318 Gm5621-201ENSMUST00000187303 640 ntBASIC8.89□□□□□ -0.99
Col8a2P25318 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC8.89□□□□□ -0.99
Col8a2P25318 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC8.89□□□□□ -0.99
Col8a2P25318 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC8.89□□□□□ -0.99
Col8a2P25318 AC154431.1-201ENSMUST00000224910 880 ntBASIC8.89□□□□□ -0.99
Col8a2P25318 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Col8a2P25318 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Col8a2P25318 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Col8a2P25318 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col8a2P25318 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms