Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.87□□□□□ -0.67
Hmga1P17095 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hmga1P17095 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.87□□□□□ -0.67
Hmga1P17095 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Hmga1P17095 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.87□□□□□ -0.67
Hmga1P17095 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Hmga1P17095 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC10.87□□□□□ -0.67
Hmga1P17095 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC10.87□□□□□ -0.67
Hmga1P17095 Gm28916-201ENSMUST00000186988 699 ntBASIC10.87□□□□□ -0.67
Hmga1P17095 Gm37390-201ENSMUST00000192452 872 ntBASIC10.87□□□□□ -0.67
Hmga1P17095 Gm5311-201ENSMUST00000203518 709 ntBASIC10.87□□□□□ -0.67
Hmga1P17095 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC10.87□□□□□ -0.67
Hmga1P17095 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.87□□□□□ -0.67
Hmga1P17095 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC10.87□□□□□ -0.67
Hmga1P17095 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC10.87□□□□□ -0.67
Hmga1P17095 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.87□□□□□ -0.67
Hmga1P17095 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hmga1P17095 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.87□□□□□ -0.67
Hmga1P17095 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC10.87□□□□□ -0.67
Hmga1P17095 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.87□□□□□ -0.67
Hmga1P17095 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.87□□□□□ -0.67
Hmga1P17095 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hmga1P17095 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hmga1P17095 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hmga1P17095 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC10.87□□□□□ -0.67
Hmga1P17095 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmga1P17095 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC10.87□□□□□ -0.67
Hmga1P17095 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hmga1P17095 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmga1P17095 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Hmga1P17095 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC10.86□□□□□ -0.67
Hmga1P17095 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmga1P17095 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmga1P17095 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm22751-201ENSMUST00000102077 109 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Mir692-3-201ENSMUST00000102079 109 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Mir692-2-201ENSMUST00000102081 109 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm15707-201ENSMUST00000118804 996 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm24078-201ENSMUST00000158184 103 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm4960-201ENSMUST00000182928 1001 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Mir6359-201ENSMUST00000183668 81 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Gm44388-201ENSMUST00000204350 258 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm7904-201ENSMUST00000217049 465 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmga1P17095 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 AC139155.1-201ENSMUST00000226043 444 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hmga1P17095 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hmga1P17095 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hmga1P17095 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmga1P17095 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmga1P17095 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.86□□□□□ -0.67
Hmga1P17095 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmga1P17095 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms