Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hoxc9P09633 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.76□□□□□ -0.21
Hoxc9P09633 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Hoxc9P09633 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Hoxc9P09633 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Hoxc9P09633 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Hoxc9P09633 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC13.75□□□□□ -0.21
Hoxc9P09633 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Hoxc9P09633 Gm7251-201ENSMUST00000182661 1009 ntBASIC13.75□□□□□ -0.21
Hoxc9P09633 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC13.75□□□□□ -0.21
Hoxc9P09633 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC13.75□□□□□ -0.21
Hoxc9P09633 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Hoxc9P09633 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC13.75□□□□□ -0.21
Hoxc9P09633 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.75□□□□□ -0.21
Hoxc9P09633 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Hoxc9P09633 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxc9P09633 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Gm7190-201ENSMUST00000118669 1452 ntBASIC13.74□□□□□ -0.21
Hoxc9P09633 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.74□□□□□ -0.21
Hoxc9P09633 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Gm13898-201ENSMUST00000141865 610 ntBASIC13.74□□□□□ -0.21
Hoxc9P09633 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC13.74□□□□□ -0.21
Hoxc9P09633 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Gm4866-201ENSMUST00000197408 589 ntBASIC13.74□□□□□ -0.21
Hoxc9P09633 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC13.74□□□□□ -0.21
Hoxc9P09633 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC13.74□□□□□ -0.21
Hoxc9P09633 Gm18749-201ENSMUST00000222410 692 ntBASIC13.74□□□□□ -0.21
Hoxc9P09633 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Hoxc9P09633 Mir341-201ENSMUST00000093593 96 ntBASIC13.74□□□□□ -0.21
Hoxc9P09633 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Hoxc9P09633 Gm10581-201ENSMUST00000097986 231 ntBASIC13.74□□□□□ -0.21
Hoxc9P09633 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Hoxc9P09633 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
Hoxc9P09633 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hoxc9P09633 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxc9P09633 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hoxc9P09633 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc9P09633 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc9P09633 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hoxc9P09633 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.73□□□□□ -0.21
Hoxc9P09633 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc9P09633 Gm15599-201ENSMUST00000122283 1345 ntBASIC13.73□□□□□ -0.21
Hoxc9P09633 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc9P09633 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc9P09633 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc9P09633 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc9P09633 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms