Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.34□□□□□ -0.91
P04224 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.34□□□□□ -0.91
P04224 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.34□□□□□ -0.91
P04224 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Utp14b-202ENSMUST00000151622 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Gm37813-201ENSMUST00000195003 3695 ntBASIC9.34□□□□□ -0.91
P04224 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.34□□□□□ -0.91
P04224 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P04224 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Zfp536-206ENSMUST00000176205 4372 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.34□□□□□ -0.91
P04224 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P04224 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P04224 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
P04224 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC9.33□□□□□ -0.92
P04224 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
P04224 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
P04224 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
P04224 Gm4784-201ENSMUST00000117365 1824 ntBASIC9.33□□□□□ -0.92
P04224 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
P04224 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
P04224 Gm26815-201ENSMUST00000181200 3366 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.33□□□□□ -0.92
P04224 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.33□□□□□ -0.92
P04224 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.33□□□□□ -0.92
P04224 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.33□□□□□ -0.92
P04224 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Gm11941-201ENSMUST00000119904 610 ntBASIC9.33□□□□□ -0.92
P04224 Gm13461-201ENSMUST00000120980 662 ntBASIC9.33□□□□□ -0.92
P04224 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
P04224 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Gm3150-201ENSMUST00000166418 204 ntBASIC9.33□□□□□ -0.92
P04224 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Gm29499-201ENSMUST00000189151 486 ntBASIC9.33□□□□□ -0.92
P04224 Gm28329-201ENSMUST00000191208 689 ntBASIC9.33□□□□□ -0.92
P04224 Gm29171-201ENSMUST00000191397 486 ntBASIC9.33□□□□□ -0.92
P04224 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.33□□□□□ -0.92
P04224 Gm7504-201ENSMUST00000201449 424 ntBASIC9.33□□□□□ -0.92
P04224 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.33□□□□□ -0.92
P04224 AC140293.1-201ENSMUST00000225626 1247 ntBASIC9.33□□□□□ -0.92
P04224 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.33□□□□□ -0.92
P04224 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Manba-201ENSMUST00000029814 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC9.33□□□□□ -0.92
P04224 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.33□□□□□ -0.92
P04224 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Cemip-201ENSMUST00000064174 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Ubap2-201ENSMUST00000030143 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P04224 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
P04224 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P04224 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
P04224 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
P04224 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P04224 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.32□□□□□ -0.92
P04224 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P04224 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P04224 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.32□□□□□ -0.92
P04224 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.32□□□□□ -0.92
P04224 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P04224 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.32□□□□□ -0.92
P04224 Gm15549-201ENSMUST00000121595 622 ntBASIC9.32□□□□□ -0.92
P04224 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
P04224 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P04224 Gm23085-201ENSMUST00000157849 293 ntBASIC9.32□□□□□ -0.92
P04224 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
P04224 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms