Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm8482-201ENSMUST00000117972 471 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm13542-201ENSMUST00000118484 637 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm13841-201ENSMUST00000118829 483 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm11449-201ENSMUST00000119175 476 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm13864-201ENSMUST00000119745 785 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 4933428C19Rik-201ENSMUST00000146043 818 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm17228-201ENSMUST00000165006 491 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm8210-201ENSMUST00000178557 483 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm15454-201ENSMUST00000179718 483 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 AC162893.1-201ENSMUST00000207732 1085 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 AC118704.1-201ENSMUST00000225022 695 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Slc51b-201ENSMUST00000065894 709 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm6344-201ENSMUST00000075962 483 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Rpl7a-ps8-201ENSMUST00000094754 801 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Cyp19a1-201ENSMUST00000034811 2373 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.78□□□□□ -0.68
Ccdc188F6WEU2 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Gm19114-201ENSMUST00000193972 1357 ntBASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Nr1h4-202ENSMUST00000105296 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc188F6WEU2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Mkln1os-201ENSMUST00000139185 1864 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Rad52-212ENSMUST00000162461 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm12452-201ENSMUST00000117128 331 ntBASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm13623-201ENSMUST00000118359 625 ntBASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm9434-201ENSMUST00000118975 813 ntBASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm13631-201ENSMUST00000140978 654 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Cox6c-201ENSMUST00000014457 503 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm17828-201ENSMUST00000183380 799 ntBASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 5031425E22Rik-203ENSMUST00000188328 828 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm29168-201ENSMUST00000189953 687 ntBASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm19566-201ENSMUST00000199576 610 ntBASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm7384-201ENSMUST00000203682 530 ntBASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 AC161581.1-201ENSMUST00000228696 318 ntBASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Klk11-201ENSMUST00000080211 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms