Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 AC207128.2-201ENSMUST00000223708 1924 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm13094-201ENSMUST00000117930 409 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm28032-201ENSMUST00000184104 96 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm37851-201ENSMUST00000193871 889 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm9204-201ENSMUST00000212641 947 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm44153-201ENSMUST00000204162 1580 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm42432-201ENSMUST00000197902 1617 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm43152-201ENSMUST00000202495 1638 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm14165-201ENSMUST00000121456 952 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm4462-201ENSMUST00000166453 492 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm38321-201ENSMUST00000195053 235 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm18539-201ENSMUST00000204745 1090 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Gm25580-201ENSMUST00000083409 327 ntBASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usf3B2RUQ2 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Gm5308-201ENSMUST00000196752 1354 ntBASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Gm23612-201ENSMUST00000103823 110 ntBASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Gm23576-201ENSMUST00000179918 110 ntBASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Gm28746-201ENSMUST00000187453 380 ntBASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Gm44814-201ENSMUST00000207018 434 ntBASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 AC164556.1-201ENSMUST00000221318 751 ntBASIC8.94□□□□□ -0.98
Usf3B2RUQ2 CT030166.5-201ENSMUST00000222249 420 ntBASIC8.94□□□□□ -0.98
Usf3B2RUQ2 AC174797.2-201ENSMUST00000225835 165 ntBASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usf3B2RUQ2 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms