Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Col4a6B1AVK5 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.77□□□□□ -0.68
Col4a6B1AVK5 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.77□□□□□ -0.68
Col4a6B1AVK5 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col4a6B1AVK5 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col4a6B1AVK5 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Col4a6B1AVK5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col4a6B1AVK5 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gm11652-201ENSMUST00000117842 1267 ntBASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gm8661-201ENSMUST00000118688 992 ntBASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gm14834-201ENSMUST00000119416 795 ntBASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gm4398-201ENSMUST00000182698 992 ntBASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gm17764-201ENSMUST00000185925 391 ntBASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gm37020-201ENSMUST00000195303 992 ntBASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gm44131-201ENSMUST00000203036 394 ntBASIC10.77□□□□□ -0.69
Col4a6B1AVK5 AC155293.1-201ENSMUST00000219793 1026 ntBASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Col4a6B1AVK5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm11573-201ENSMUST00000119956 394 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm5851-201ENSMUST00000194132 1204 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 1700013G24Rik-201ENSMUST00000048893 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm42879-201ENSMUST00000198656 2214 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Vmn1r44-203ENSMUST00000226120 1772 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 AC139845.1-201ENSMUST00000147013 1334 ntTSL 5 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm42974-201ENSMUST00000199556 2654 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm9260-201ENSMUST00000199781 1380 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm13527-201ENSMUST00000117926 691 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm5054-201ENSMUST00000119351 453 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm15798-201ENSMUST00000120082 408 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Mir1896-201ENSMUST00000122641 81 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Ighv5-10-201ENSMUST00000194591 252 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm43305-202ENSMUST00000225083 705 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Cnfn-201ENSMUST00000076276 524 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Gm7052-201ENSMUST00000167568 1512 ntBASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col4a6B1AVK5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms