Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm13192-201ENSMUST00000101199 208 ntBASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm10443-201ENSMUST00000119024 210 ntBASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm12736-201ENSMUST00000119330 236 ntBASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm8464-202ENSMUST00000146697 1142 ntBASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm4750-201ENSMUST00000151942 1142 ntBASIC10.51□□□□□ -0.73
Rrp8Q9DB85 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm20568-201ENSMUST00000197129 208 ntBASIC10.51□□□□□ -0.73
Rrp8Q9DB85 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rrp8Q9DB85 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm13608-201ENSMUST00000121807 1406 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm11473-201ENSMUST00000118980 359 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm14997-201ENSMUST00000119232 636 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm14231-201ENSMUST00000120090 592 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm14176-201ENSMUST00000121302 477 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm26174-201ENSMUST00000158415 219 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm22662-201ENSMUST00000175290 256 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm37944-201ENSMUST00000194233 414 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 AC124613.1-201ENSMUST00000198711 88 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm17936-201ENSMUST00000199413 988 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm5738-201ENSMUST00000206016 779 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm8796-201ENSMUST00000219122 936 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 AC134537.1-201ENSMUST00000219205 265 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms