Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.26□□□□□ -0.61
Usp11Q99K46 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Nln-205ENSMUST00000224945 2486 ntBASIC11.26□□□□□ -0.61
Usp11Q99K46 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC11.26□□□□□ -0.61
Usp11Q99K46 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm12986-201ENSMUST00000119037 967 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Mir1896-201ENSMUST00000122641 81 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm22442-201ENSMUST00000157256 144 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm25343-201ENSMUST00000157460 107 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Snord55-201ENSMUST00000174939 79 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm37597-201ENSMUST00000191853 382 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm5100-201ENSMUST00000195631 589 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm9369-201ENSMUST00000196009 733 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm9111-201ENSMUST00000219394 709 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Id2-203ENSMUST00000222667 958 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp11Q99K46 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.25□□□□□ -0.61
Usp11Q99K46 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.24□□□□□ -0.61
Usp11Q99K46 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Usp11Q99K46 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.24□□□□□ -0.61
Usp11Q99K46 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.24□□□□□ -0.61
Usp11Q99K46 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Usp11Q99K46 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Usp11Q99K46 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.24□□□□□ -0.61
Usp11Q99K46 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.24□□□□□ -0.61
Usp11Q99K46 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.24□□□□□ -0.61
Usp11Q99K46 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Usp11Q99K46 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.24□□□□□ -0.61
Usp11Q99K46 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.24□□□□□ -0.61
Usp11Q99K46 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.24□□□□□ -0.61
Usp11Q99K46 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.24□□□□□ -0.61
Usp11Q99K46 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Usp11Q99K46 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Usp11Q99K46 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Usp11Q99K46 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.24□□□□□ -0.61
Usp11Q99K46 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Usp11Q99K46 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms