Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm20796-201ENSMUST00000180355 5838 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm11560-201ENSMUST00000117567 948 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm11628-201ENSMUST00000117568 171 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm12663-201ENSMUST00000118481 958 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm15782-201ENSMUST00000121073 445 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm13445-201ENSMUST00000121664 307 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm24248-201ENSMUST00000157321 322 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm25343-201ENSMUST00000157460 107 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm19891-201ENSMUST00000189771 303 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm5302-201ENSMUST00000202130 796 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm44814-201ENSMUST00000207018 434 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm25580-201ENSMUST00000083409 327 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga4Q91XY4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Pcdhga4Q91XY4 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga4Q91XY4 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms