Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Gm43372-201ENSMUST00000202662 3016 ntBASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cchcr1Q8K2I2 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm11451-201ENSMUST00000118946 630 ntBASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm11824-201ENSMUST00000120191 846 ntBASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm12516-201ENSMUST00000120819 385 ntBASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm5529-201ENSMUST00000165691 891 ntBASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm44329-201ENSMUST00000197469 112 ntBASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm43811-201ENSMUST00000202862 695 ntBASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm10179-201ENSMUST00000086233 688 ntBASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cchcr1Q8K2I2 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cchcr1Q8K2I2 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cchcr1Q8K2I2 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Gm13117-201ENSMUST00000120894 691 ntBASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Gm42660-201ENSMUST00000197733 947 ntBASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cchcr1Q8K2I2 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms