Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm23647-201ENSMUST00000175042 109 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Rn5s-201ENSMUST00000177555 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s108-201ENSMUST00000177575 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s121-201ENSMUST00000177589 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s146-201ENSMUST00000177889 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm22109-201ENSMUST00000177995 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm22291-201ENSMUST00000178027 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s141-201ENSMUST00000178066 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm23284-201ENSMUST00000178069 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s100-201ENSMUST00000178106 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s111-201ENSMUST00000178203 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s105-201ENSMUST00000178499 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s149-201ENSMUST00000178520 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s103-201ENSMUST00000178755 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s123-201ENSMUST00000178804 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s142-201ENSMUST00000178820 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s144-201ENSMUST00000178859 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s139-201ENSMUST00000178975 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s134-201ENSMUST00000178983 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s136-201ENSMUST00000179080 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm25018-201ENSMUST00000179081 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s104-201ENSMUST00000179107 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s113-201ENSMUST00000179143 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s133-201ENSMUST00000179275 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s117-201ENSMUST00000179431 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm25212-201ENSMUST00000179432 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s138-201ENSMUST00000179476 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s122-201ENSMUST00000179500 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s143-201ENSMUST00000179542 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s107-201ENSMUST00000179704 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm26391-201ENSMUST00000179843 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s110-201ENSMUST00000179995 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s128-201ENSMUST00000180096 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 n-R5s124-201ENSMUST00000180334 119 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm9625-201ENSMUST00000180422 955 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm38247-201ENSMUST00000194675 433 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm43974-201ENSMUST00000205080 684 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm45610-201ENSMUST00000209227 784 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 CT572999.1-201ENSMUST00000220315 1260 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 AC126799.1-201ENSMUST00000221976 246 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 AC174797.2-201ENSMUST00000225835 165 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm25514-201ENSMUST00000083860 135 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm24089-201ENSMUST00000093696 109 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm22594-201ENSMUST00000104251 130 ntBASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh19Q80TF3 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms