Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm8482-201ENSMUST00000117972 471 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm13841-201ENSMUST00000118829 483 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm15355-201ENSMUST00000118929 285 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm11449-201ENSMUST00000119175 476 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm14250-201ENSMUST00000148458 566 ntTSL 3 BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm8210-201ENSMUST00000178557 483 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm15454-201ENSMUST00000179718 483 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm7251-201ENSMUST00000182661 1009 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm28645-201ENSMUST00000185859 564 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 AC134860.5-201ENSMUST00000225071 1249 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm6344-201ENSMUST00000075962 483 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Gm36638-202ENSMUST00000192073 2169 ntBASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Spg11Q3UHA3 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Gm5244-201ENSMUST00000164001 339 ntBASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Gm38941-201ENSMUST00000208606 529 ntBASIC9.82□□□□□ -0.84
Spg11Q3UHA3 AC154264.2-201ENSMUST00000216569 403 ntTSL 5 BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 AC155929.2-201ENSMUST00000218541 307 ntBASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Gm14264-201ENSMUST00000147141 1864 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Sectm1a-202ENSMUST00000100126 680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Mir6972-201ENSMUST00000184774 64 ntBASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Mif-201ENSMUST00000038169 544 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Spg11Q3UHA3 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Tpmt-201ENSMUST00000021806 2708 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Spg11Q3UHA3 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms