Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm5513-201ENSMUST00000072982 1218 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.9□□□□□ -0.66
Ebf1Q07802 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.9□□□□□ -0.66
Ebf1Q07802 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.9□□□□□ -0.66
Ebf1Q07802 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm8152-201ENSMUST00000120842 637 ntBASIC10.9□□□□□ -0.66
Ebf1Q07802 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm12745-201ENSMUST00000121767 214 ntBASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm8601-201ENSMUST00000182096 909 ntBASIC10.9□□□□□ -0.66
Ebf1Q07802 Mir6387-201ENSMUST00000184042 108 ntBASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.9□□□□□ -0.66
Ebf1Q07802 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.9□□□□□ -0.66
Ebf1Q07802 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm10254-201ENSMUST00000052888 867 ntBASIC10.9□□□□□ -0.66
Ebf1Q07802 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.9□□□□□ -0.66
Ebf1Q07802 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ebf1Q07802 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ebf1Q07802 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ebf1Q07802 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ebf1Q07802 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
Ebf1Q07802 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ebf1Q07802 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Ebf1Q07802 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ebf1Q07802 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ebf1Q07802 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.89□□□□□ -0.67
Ebf1Q07802 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ebf1Q07802 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Ebf1Q07802 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Ebf1Q07802 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ebf1Q07802 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Gm4943-201ENSMUST00000132879 424 ntBASIC10.89□□□□□ -0.67
Ebf1Q07802 Gm5526-201ENSMUST00000153604 423 ntBASIC10.89□□□□□ -0.67
Ebf1Q07802 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.89□□□□□ -0.67
Ebf1Q07802 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Ebf1Q07802 Gm7985-201ENSMUST00000183329 981 ntBASIC10.89□□□□□ -0.67
Ebf1Q07802 Gm37319-201ENSMUST00000193500 636 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms