Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm9873-201ENSMUST00000063891 1097 ntBASIC9.54□□□□□ -0.88
H3f3aP84244 Gm7536-201ENSMUST00000077389 444 ntBASIC9.54□□□□□ -0.88
H3f3aP84244 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3aP84244 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
H3f3aP84244 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.54□□□□□ -0.88
H3f3aP84244 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3aP84244 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.54□□□□□ -0.88
H3f3aP84244 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3aP84244 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
H3f3aP84244 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.54□□□□□ -0.88
H3f3aP84244 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.54□□□□□ -0.88
H3f3aP84244 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3aP84244 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3aP84244 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3aP84244 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3aP84244 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3aP84244 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
H3f3aP84244 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3aP84244 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3aP84244 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm15264-201ENSMUST00000118050 502 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm13351-201ENSMUST00000118087 414 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.53□□□□□ -0.88
H3f3aP84244 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm8723-201ENSMUST00000166076 820 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Gm8701-201ENSMUST00000169259 874 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Gm18733-202ENSMUST00000174447 401 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Gm22876-201ENSMUST00000175450 298 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Gm4812-201ENSMUST00000182847 993 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC9.53□□□□□ -0.88
H3f3aP84244 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.53□□□□□ -0.88
H3f3aP84244 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm44605-201ENSMUST00000206892 949 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC9.53□□□□□ -0.88
H3f3aP84244 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
H3f3aP84244 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
H3f3aP84244 AC140293.1-201ENSMUST00000225626 1247 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.53□□□□□ -0.88
H3f3aP84244 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
H3f3aP84244 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3aP84244 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
H3f3aP84244 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
H3f3aP84244 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
H3f3aP84244 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
H3f3aP84244 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
H3f3aP84244 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
H3f3aP84244 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
H3f3aP84244 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
H3f3aP84244 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
H3f3aP84244 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
H3f3aP84244 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms