Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.01□□□□□ -0.65
Sox1P53783 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Sox1P53783 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Sox1P53783 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox1P53783 Gm6721-201ENSMUST00000218353 1445 ntBASIC11.01□□□□□ -0.65
Sox1P53783 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11□□□□□ -0.65
Sox1P53783 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11□□□□□ -0.65
Sox1P53783 Gm38187-201ENSMUST00000195609 4709 ntBASIC11□□□□□ -0.65
Sox1P53783 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Sox1P53783 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox1P53783 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11□□□□□ -0.65
Sox1P53783 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Gm15369-201ENSMUST00000119681 394 ntBASIC11□□□□□ -0.65
Sox1P53783 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC11□□□□□ -0.65
Sox1P53783 Gm6286-201ENSMUST00000145247 762 ntBASIC11□□□□□ -0.65
Sox1P53783 Gm16329-201ENSMUST00000148174 371 ntBASIC11□□□□□ -0.65
Sox1P53783 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC11□□□□□ -0.65
Sox1P53783 Gm27390-201ENSMUST00000184516 176 ntBASIC11□□□□□ -0.65
Sox1P53783 Gm20281-201ENSMUST00000188225 267 ntBASIC11□□□□□ -0.65
Sox1P53783 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC11□□□□□ -0.65
Sox1P53783 Gm5696-201ENSMUST00000189850 552 ntBASIC11□□□□□ -0.65
Sox1P53783 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC11□□□□□ -0.65
Sox1P53783 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Gm43833-201ENSMUST00000198828 293 ntBASIC11□□□□□ -0.65
Sox1P53783 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC11□□□□□ -0.65
Sox1P53783 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC11□□□□□ -0.65
Sox1P53783 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC11□□□□□ -0.65
Sox1P53783 n-R5s5-201ENSMUST00000083134 119 ntBASIC11□□□□□ -0.65
Sox1P53783 Gm26132-201ENSMUST00000083166 148 ntBASIC11□□□□□ -0.65
Sox1P53783 Olfr1057-201ENSMUST00000099892 948 ntAPPRIS P1 BASIC11□□□□□ -0.65
Sox1P53783 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox1P53783 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11□□□□□ -0.65
Sox1P53783 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Sox1P53783 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Gm42467-201ENSMUST00000202954 1447 ntBASIC11□□□□□ -0.65
Sox1P53783 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox1P53783 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox1P53783 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11□□□□□ -0.65
Sox1P53783 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox1P53783 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox1P53783 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox1P53783 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sox1P53783 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox1P53783 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Gm11652-201ENSMUST00000117842 1267 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Gm15031-201ENSMUST00000121341 210 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox1P53783 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Gm25770-201ENSMUST00000158566 115 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Gm23521-201ENSMUST00000177845 110 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Gm27383-201ENSMUST00000184418 361 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox1P53783 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Gm43097-201ENSMUST00000196867 151 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Gm42441-201ENSMUST00000199778 748 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Gm9515-201ENSMUST00000200276 647 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC10.99□□□□□ -0.65
Sox1P53783 AC129323.1-201ENSMUST00000216733 470 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC10.99□□□□□ -0.65
Sox1P53783 Gm8557-201ENSMUST00000220777 475 ntBASIC10.99□□□□□ -0.65
Sox1P53783 CT025642.1-201ENSMUST00000224734 1219 ntBASIC10.99□□□□□ -0.65
Sox1P53783 AC160109.1-201ENSMUST00000225592 729 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms