Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11□□□□□ -0.65
Cxcl12P40224 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11□□□□□ -0.65
Cxcl12P40224 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11□□□□□ -0.65
Cxcl12P40224 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cxcl12P40224 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11□□□□□ -0.65
Cxcl12P40224 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cxcl12P40224 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Gm15661-201ENSMUST00000117390 556 ntBASIC11□□□□□ -0.65
Cxcl12P40224 Gm11771-201ENSMUST00000118124 732 ntBASIC11□□□□□ -0.65
Cxcl12P40224 Gm12240-201ENSMUST00000120178 229 ntBASIC11□□□□□ -0.65
Cxcl12P40224 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC11□□□□□ -0.65
Cxcl12P40224 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC11□□□□□ -0.65
Cxcl12P40224 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC11□□□□□ -0.65
Cxcl12P40224 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Rce1-203ENSMUST00000224707 1255 ntBASIC11□□□□□ -0.65
Cxcl12P40224 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11□□□□□ -0.65
Cxcl12P40224 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11□□□□□ -0.65
Cxcl12P40224 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11□□□□□ -0.65
Cxcl12P40224 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cxcl12P40224 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cxcl12P40224 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Gm11701-201ENSMUST00000121277 1142 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 Gm23899-201ENSMUST00000158112 90 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 Gm6946-201ENSMUST00000182237 987 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Gm45225-201ENSMUST00000206852 1139 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 AC154643.1-201ENSMUST00000225643 625 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 AC129017.2-201ENSMUST00000226118 1284 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Cxcl12P40224 AC130671.3-201ENSMUST00000227393 1897 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 AC147366.2-201ENSMUST00000226859 2038 ntBASIC10.99□□□□□ -0.65
Cxcl12P40224 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl12P40224 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms