Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 CT009718.3-201ENSMUST00000221116 367 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Upk2P38575 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Upk2P38575 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Upk2P38575 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Upk2P38575 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Upk2P38575 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Gm44740-201ENSMUST00000205603 1614 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC9.34□□□□□ -0.91
Upk2P38575 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Upk2P38575 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Upk2P38575 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Upk2P38575 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Upk2P38575 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Gm15031-201ENSMUST00000121341 210 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Gm12176-201ENSMUST00000121420 875 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Gm11980-201ENSMUST00000121445 986 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC9.34□□□□□ -0.91
Upk2P38575 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Gm9358-201ENSMUST00000183067 927 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Mir7035-201ENSMUST00000184713 82 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Gm20781-201ENSMUST00000193154 693 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Gm21736-201ENSMUST00000195399 693 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Gm34023-201ENSMUST00000195539 217 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Gm45258-201ENSMUST00000210042 853 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.34□□□□□ -0.91
Upk2P38575 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Upk2P38575 Gm18968-201ENSMUST00000221319 862 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Gm16380-201ENSMUST00000077997 478 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 n-R5s185-201ENSMUST00000083953 119 ntBASIC9.34□□□□□ -0.91
Upk2P38575 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Upk2P38575 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Upk2P38575 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Upk2P38575 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Upk2P38575 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Upk2P38575 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.34□□□□□ -0.91
Upk2P38575 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Upk2P38575 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Upk2P38575 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Upk2P38575 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Upk2P38575 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC9.33□□□□□ -0.92
Upk2P38575 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Upk2P38575 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC9.33□□□□□ -0.92
Upk2P38575 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Upk2P38575 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Upk2P38575 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms