Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC12.39□□□□□ -0.43
Pde6aP27664 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.39□□□□□ -0.43
Pde6aP27664 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pde6aP27664 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.38□□□□□ -0.43
Pde6aP27664 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.38□□□□□ -0.43
Pde6aP27664 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pde6aP27664 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pde6aP27664 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Gm14113-201ENSMUST00000121399 976 ntBASIC12.38□□□□□ -0.43
Pde6aP27664 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.38□□□□□ -0.43
Pde6aP27664 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.38□□□□□ -0.43
Pde6aP27664 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Gm37390-201ENSMUST00000192452 872 ntBASIC12.38□□□□□ -0.43
Pde6aP27664 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.38□□□□□ -0.43
Pde6aP27664 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Pde6aP27664 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.38□□□□□ -0.43
Pde6aP27664 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pde6aP27664 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pde6aP27664 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pde6aP27664 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pde6aP27664 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.38□□□□□ -0.43
Pde6aP27664 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6aP27664 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Pde6aP27664 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.37□□□□□ -0.43
Pde6aP27664 Gm8482-201ENSMUST00000117972 471 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm13841-201ENSMUST00000118829 483 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm11449-201ENSMUST00000119175 476 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm11824-201ENSMUST00000120191 846 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.37□□□□□ -0.43
Pde6aP27664 Gm16441-201ENSMUST00000138176 924 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm6038-201ENSMUST00000154310 948 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm8210-201ENSMUST00000178557 483 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm15454-201ENSMUST00000179718 483 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm26989-201ENSMUST00000182608 749 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm44640-201ENSMUST00000206894 247 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm5189-201ENSMUST00000221796 261 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 AC161172.1-201ENSMUST00000227801 486 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Gm6344-201ENSMUST00000075962 483 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.37□□□□□ -0.43
Pde6aP27664 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pde6aP27664 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.37□□□□□ -0.43
Pde6aP27664 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pde6aP27664 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pde6aP27664 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pde6aP27664 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pde6aP27664 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.37□□□□□ -0.43
Pde6aP27664 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6aP27664 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pde6aP27664 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.36□□□□□ -0.43
Pde6aP27664 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms